STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65888.1Hypothetical protein. (233 aa)    
Predicted Functional Partners:
AKB65887.1
Hypothetical protein.
 
     0.937
AKB64582.1
Hypothetical protein.
 
     0.737
AKB65077.1
Hypothetical protein.
 
     0.737
AKB65289.1
Hypothetical protein.
 
     0.737
AKB66057.1
Hypothetical protein.
 
     0.737
AKB66397.1
Hypothetical protein.
 
     0.674
AKB64970.1
Hypothetical protein.
 
     0.637
AKB64648.1
Mobile element protein.
  
     0.528
AKB64827.1
Mobile element protein.
  
     0.528
AKB65994.1
Mobile element protein.
  
     0.528
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.