STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65895.1Formylmethanofuran dehydrogenase (tungsten) subunit D. (127 aa)    
Predicted Functional Partners:
AKB65897.1
Formylmethanofuran dehydrogenase subunit A.
 
 0.991
AKB65898.1
Formylmethanofuran dehydrogenase subunit C.
 
 0.991
AKB64466.1
Tungsten-containing formylmethanofuran dehydrogenase 2 subunit G.
 
 0.990
ftr
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family.
 
  
 0.990
AKB65896.1
Formylmethanofuran dehydrogenase subunit B.
 
 
 0.989
AKB64469.1
Polyferredoxin protein MvhB.
 
 0.987
AKB66298.1
Formylmethanofuran dehydrogenase subunit A.
 
 0.971
AKB66297.1
Formylmethanofuran dehydrogenase (molybdenum) subunit C.
 
 0.968
AKB66295.1
Formylmethanofuran dehydrogenase (molybdenum) subunit B.
 
 
 0.961
AKB64465.1
Formylmethanofuran dehydrogenase subunit B.
 
 
 0.957
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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