STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB65913.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
AKB65914.1
tRNAHis-5'-guanylyltransferase.
       0.933
tyrS
Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 3 subfamily.
       0.816
AKB63804.1
Hypothetical protein.
  
  
 0.794
AKB63565.1
Hypothetical protein.
  
    0.757
AKB64204.1
Hypothetical protein.
 
     0.733
AKB63592.1
Hypothetical protein.
  
     0.732
AKB66349.1
Integral membrane protein.
  
    0.732
AKB64051.1
Hypothetical protein.
  
   
 0.724
AKB63858.1
Oligosaccharyl transferase.
  
     0.719
AKB64203.1
Replication protein A (two OB fold, one zinc finger).
 
     0.719
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.