STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65931.1Glycosyltransferase. (375 aa)    
Predicted Functional Partners:
AKB65930.1
Hypothetical protein.
  
  
 0.677
AKB63330.1
Glucose-1-phosphate thymidylyltransferase.
 
 0.668
AKB63314.1
UDP-glucose 4-epimerase.
 
 
 0.631
AKB63337.1
dTDP-glucose 4,6-dehydratase.
 
 
 0.601
AKB66224.1
Glycosyl transferase, group 1.
 
   
 0.600
AKB63366.1
UDP-glucose 4-epimerase.
 
 
 0.553
AKB65537.1
Cytidine kinase; Belongs to the carbohydrate kinase PfkB family.
 
 
 0.523
AKB65152.1
Putative glycogen debranching enzyme, archaeal type, TIGR01561.
 
 0.521
AKB65859.1
Putative glycogen debranching enzyme, archaeal type, TIGR01561.
 
 0.521
AKB65666.1
Glycosyltransferase.
 
 
 0.508
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.