STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65935.1Digeranylgeranylglyceryl phosphate synthase. (297 aa)    
Predicted Functional Partners:
AKB64217.1
Membrane alanine aminopeptidase N.
  
     0.709
AKB66292.1
Hypothetical protein.
  
     0.567
AKB65259.1
Hypothetical protein.
  
     0.560
AKB65273.1
Cell surface protein.
  
     0.540
AKB65936.1
Glutamate transport ATP-binding protein.
       0.539
AKB65937.1
Glutamate transport membrane-spanning protein.
       0.539
AKB63374.1
Hypothetical protein.
  
     0.516
AKB65776.1
Hypothetical protein.
  
     0.514
AKB64987.1
Cell surface protein.
  
     0.498
AKB65600.1
Cell surface protein.
  
     0.495
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.