STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65937.1Glutamate transport membrane-spanning protein. (231 aa)    
Predicted Functional Partners:
AKB65936.1
Glutamate transport ATP-binding protein.
 0.999
AKB65938.1
Glutamine ABC transporter, periplasmic glutamine-binding protein; TCDB 3.A.1.3.2.
 0.999
AKB64438.1
Integral membrane protein.
 
  
 0.631
AKB64200.1
L-proline glycine betaine ABC transport system permease protein ProW; TCDB 3.A.1.12.1.
    
 0.599
AKB64201.1
Glycine betaine transport system, permease protein.
    
 0.599
AKB63547.1
ABC transporter, ATP-binding protein.
 
 
 0.598
AKB64856.1
ABC transporter, ATP-binding protein.
 
 
 0.586
AKB64198.1
L-proline glycine betaine binding ABC transporter protein ProX; TCDB 3.A.1.12.1; Osmotic adaptation.
    
 0.574
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
 
 
 0.571
AKB64170.1
Chemotaxis protein CheC -- inhibitor of MCP methylation.
    
   0.559
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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