Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB65957.1Hypothetical protein. (77 aa)    
Predicted Functional Partners:
AKB65958.1
Hypothetical protein.
 
 
 
 0.981
AKB64499.1
Hypothetical protein.
 
 
 
 0.899
AKB64361.1
Hypothetical protein.
 
 
 
 0.833
AKB64293.1
Hypothetical protein.
 
 
 
 0.807
AKB63443.1
Hypothetical protein.
 
 
 
 0.802
AKB63445.1
Hypothetical protein.
   
 
 0.704
AKB64498.1
Hypothetical protein.
  
     0.662
AKB64362.1
Hypothetical protein.
  
     0.554
AKB64227.1
Hypothetical protein.
 
     0.447
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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