STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65965.1Sensory transduction histidine kinase. (608 aa)    
Predicted Functional Partners:
AKB65383.1
Response regulator receiver.
 
     0.731
AKB64950.1
Response regulator receiver.
 
     0.715
AKB64952.1
Response regulator receiver.
 
     0.708
AKB64237.1
Sensory transduction histidine kinase.
  
   
 0.582
AKB63442.1
Hypothetical protein.
  
     0.540
AKB64945.1
Hypothetical protein.
  
   
 0.480
AKB64770.1
Sensory transduction histidine kinase.
  
   
 0.433
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.