Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKB63393.1 | AKB65363.1 | MSMAS_0197 | MSMAS_2167 | Phosphoserine phosphatase. | DNA-directed RNA polymerase subunit F. | 0.696 |
| AKB63393.1 | AKB65966.1 | MSMAS_0197 | MSMAS_2770 | Phosphoserine phosphatase. | Phosphoesterase. | 0.581 |
| AKB63393.1 | AKB66069.1 | MSMAS_0197 | MSMAS_2873 | Phosphoserine phosphatase. | Hypothetical protein. | 0.658 |
| AKB63393.1 | AKB66123.1 | MSMAS_0197 | MSMAS_2927 | Phosphoserine phosphatase. | Glycerol dehydrogenase. | 0.750 |
| AKB63393.1 | endA | MSMAS_0197 | MSMAS_0794 | Phosphoserine phosphatase. | tRNA-intron endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5' and 3' splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.588 |
| AKB63393.1 | priL | MSMAS_0197 | MSMAS_3266 | Phosphoserine phosphatase. | DNA primase large subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair. | 0.562 |
| AKB63393.1 | priS | MSMAS_0197 | MSMAS_2872 | Phosphoserine phosphatase. | DNA primase small subunit; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. [...] | 0.674 |
| AKB63393.1 | ribK | MSMAS_0197 | MSMAS_2965 | Phosphoserine phosphatase. | DNA-binding HTH domain in riboflavin kinase; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family. | 0.458 |
| AKB65363.1 | AKB63393.1 | MSMAS_2167 | MSMAS_0197 | DNA-directed RNA polymerase subunit F. | Phosphoserine phosphatase. | 0.696 |
| AKB65363.1 | AKB65966.1 | MSMAS_2167 | MSMAS_2770 | DNA-directed RNA polymerase subunit F. | Phosphoesterase. | 0.566 |
| AKB65363.1 | AKB66069.1 | MSMAS_2167 | MSMAS_2873 | DNA-directed RNA polymerase subunit F. | Hypothetical protein. | 0.603 |
| AKB65363.1 | AKB66123.1 | MSMAS_2167 | MSMAS_2927 | DNA-directed RNA polymerase subunit F. | Glycerol dehydrogenase. | 0.586 |
| AKB65363.1 | endA | MSMAS_2167 | MSMAS_0794 | DNA-directed RNA polymerase subunit F. | tRNA-intron endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5' and 3' splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.570 |
| AKB65363.1 | priL | MSMAS_2167 | MSMAS_3266 | DNA-directed RNA polymerase subunit F. | DNA primase large subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair. | 0.849 |
| AKB65363.1 | ribK | MSMAS_2167 | MSMAS_2965 | DNA-directed RNA polymerase subunit F. | DNA-binding HTH domain in riboflavin kinase; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family. | 0.440 |
| AKB65532.1 | AKB65963.1 | MSMAS_2336 | MSMAS_2767 | Transcriptional regulator PhoU. | Putative ski2-type helicase. | 0.436 |
| AKB65532.1 | AKB65966.1 | MSMAS_2336 | MSMAS_2770 | Transcriptional regulator PhoU. | Phosphoesterase. | 0.569 |
| AKB65532.1 | endA | MSMAS_2336 | MSMAS_0794 | Transcriptional regulator PhoU. | tRNA-intron endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5' and 3' splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.506 |
| AKB65532.1 | priL | MSMAS_2336 | MSMAS_3266 | Transcriptional regulator PhoU. | DNA primase large subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair. | 0.554 |
| AKB65532.1 | priS | MSMAS_2336 | MSMAS_2872 | Transcriptional regulator PhoU. | DNA primase small subunit; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. [...] | 0.543 |
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