Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKB63211.1 | AKB63914.1 | MSMAS_0015 | MSMAS_0718 | Replication factor A (ssDNA-binding protein). | Hypothetical protein. | 0.523 |
| AKB63211.1 | AKB65857.1 | MSMAS_0015 | MSMAS_2661 | Replication factor A (ssDNA-binding protein). | Hypothetical protein. | 0.405 |
| AKB63211.1 | AKB66052.1 | MSMAS_0015 | MSMAS_2856 | Replication factor A (ssDNA-binding protein). | Archaeal histone. | 0.655 |
| AKB63211.1 | spt5 | MSMAS_0015 | MSMAS_0290 | Replication factor A (ssDNA-binding protein). | Putative transcription antitermination protein NusG; Stimulates transcription elongation; Belongs to the archaeal Spt5 family. | 0.528 |
| AKB63211.1 | tfe | MSMAS_0015 | MSMAS_0622 | Replication factor A (ssDNA-binding protein). | Archaeal transcription factor E; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexe [...] | 0.700 |
| AKB63399.1 | AKB63914.1 | MSMAS_0203 | MSMAS_0718 | PAC2 family protein. | Hypothetical protein. | 0.586 |
| AKB63399.1 | AKB65857.1 | MSMAS_0203 | MSMAS_2661 | PAC2 family protein. | Hypothetical protein. | 0.636 |
| AKB63399.1 | AKB66052.1 | MSMAS_0203 | MSMAS_2856 | PAC2 family protein. | Archaeal histone. | 0.562 |
| AKB63399.1 | spt4 | MSMAS_0203 | MSMAS_0712 | PAC2 family protein. | DNA-directed RNA polymerase subunit E'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family. | 0.490 |
| AKB63399.1 | spt5 | MSMAS_0203 | MSMAS_0290 | PAC2 family protein. | Putative transcription antitermination protein NusG; Stimulates transcription elongation; Belongs to the archaeal Spt5 family. | 0.491 |
| AKB63399.1 | tfe | MSMAS_0203 | MSMAS_0622 | PAC2 family protein. | Archaeal transcription factor E; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexe [...] | 0.548 |
| AKB63399.1 | thrS | MSMAS_0203 | MSMAS_1381 | PAC2 family protein. | Threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.471 |
| AKB63914.1 | AKB63211.1 | MSMAS_0718 | MSMAS_0015 | Hypothetical protein. | Replication factor A (ssDNA-binding protein). | 0.523 |
| AKB63914.1 | AKB63399.1 | MSMAS_0718 | MSMAS_0203 | Hypothetical protein. | PAC2 family protein. | 0.586 |
| AKB63914.1 | AKB66052.1 | MSMAS_0718 | MSMAS_2856 | Hypothetical protein. | Archaeal histone. | 0.588 |
| AKB63914.1 | tfe | MSMAS_0718 | MSMAS_0622 | Hypothetical protein. | Archaeal transcription factor E; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexe [...] | 0.475 |
| AKB65832.1 | AKB66052.1 | MSMAS_2636 | MSMAS_2856 | Trimethylamine:corrinoid methyltransferase; Pyrrolysine-containing; Belongs to the trimethylamine methyltransferase family. | Archaeal histone. | 0.760 |
| AKB65832.1 | AKB66180.1 | MSMAS_2636 | MSMAS_2984 | Trimethylamine:corrinoid methyltransferase; Pyrrolysine-containing; Belongs to the trimethylamine methyltransferase family. | Trimethylamine:corrinoid methyltransferase; Pyrrolysine-containing; Belongs to the trimethylamine methyltransferase family. | 0.910 |
| AKB65857.1 | AKB63211.1 | MSMAS_2661 | MSMAS_0015 | Hypothetical protein. | Replication factor A (ssDNA-binding protein). | 0.405 |
| AKB65857.1 | AKB63399.1 | MSMAS_2661 | MSMAS_0203 | Hypothetical protein. | PAC2 family protein. | 0.636 |
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