STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66057.1Hypothetical protein. (148 aa)    
Predicted Functional Partners:
AKB66058.1
Hypothetical protein.
 
     0.937
AKB64581.1
Hypothetical protein.
 
     0.736
AKB65076.1
Hypothetical protein.
 
     0.736
AKB65290.1
Hypothetical protein.
 
     0.736
AKB65888.1
Hypothetical protein.
 
     0.736
AKB66396.1
Hypothetical protein.
 
     0.724
AKB64987.1
Cell surface protein.
  
     0.545
AKB66056.1
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.535
AKB64493.1
Hypothetical protein.
  
     0.509
AKB64492.1
Hypothetical protein.
  
     0.507
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.