STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66076.1Rubrerythrin. (174 aa)    
Predicted Functional Partners:
AKB64699.1
Flavodoxin.
 
  
 0.843
AKB63867.1
Rubredoxin-oxygen oxidoreductase.
 
  
 0.811
AKB64063.1
Thioredoxin.
  
  
 0.768
AKB64586.1
Rubredoxin; Belongs to the rubredoxin family.
  
  
 0.652
AKB63687.1
Alkyl hydroperoxide reductase subunit C-like protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.560
AKB64612.1
Rubredoxin.
 
   
 0.552
AKB63873.1
Superoxide reductase.
 
  
 0.547
AKB64236.1
Flavodoxin.
  
  
 0.544
AKB65042.1
Ferritin-like di-iron-carboxylate protein.
 
  
 0.532
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.