STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66078.1Hypothetical protein. (274 aa)    
Predicted Functional Partners:
AKB65221.1
Hypothetical protein.
 
     0.643
AKB66292.1
Hypothetical protein.
  
     0.643
AKB65877.1
PQQ enzyme repeat domain protein.
  
     0.608
AKB65225.1
Hypothetical protein.
  
     0.606
AKB65876.1
PQQ enzyme repeat domain protein.
  
     0.602
AKB66220.1
Hypothetical protein.
  
     0.602
AKB66153.1
Hypothetical protein.
  
     0.600
AKB63354.1
Hypothetical protein.
  
     0.588
AKB65223.1
Hypothetical protein.
  
     0.582
AKB65449.1
Hypothetical protein.
  
     0.582
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.