Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKB63225.1 | AKB64392.1 | MSMAS_0029 | MSMAS_1196 | Metallo-beta-lactamase. | Metallo-beta-lactamase. | 0.908 |
| AKB63225.1 | rnj | MSMAS_0029 | MSMAS_2913 | Metallo-beta-lactamase. | Putative Zn-dependent hydrolase in polyisoprenoid biosynthetic cluster; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily. | 0.726 |
| AKB63709.1 | AKB66108.1 | MSMAS_0513 | MSMAS_2912 | Geranylfarnesyl diphosphate synthetase; Belongs to the FPP/GGPP synthase family. | Geranylfarnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.916 |
| AKB63709.1 | rnj | MSMAS_0513 | MSMAS_2913 | Geranylfarnesyl diphosphate synthetase; Belongs to the FPP/GGPP synthase family. | Putative Zn-dependent hydrolase in polyisoprenoid biosynthetic cluster; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily. | 0.658 |
| AKB63709.1 | rpl2 | MSMAS_0513 | MSMAS_2557 | Geranylfarnesyl diphosphate synthetase; Belongs to the FPP/GGPP synthase family. | LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.578 |
| AKB63960.1 | AKB65361.1 | MSMAS_0764 | MSMAS_2165 | 3'-to-5' exoribonuclease RNase R. | Putative ribosomal RNA small subunit methyltransferase A; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.857 |
| AKB63960.1 | rnhB | MSMAS_0764 | MSMAS_1912 | 3'-to-5' exoribonuclease RNase R. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.546 |
| AKB63960.1 | rnj | MSMAS_0764 | MSMAS_2913 | 3'-to-5' exoribonuclease RNase R. | Putative Zn-dependent hydrolase in polyisoprenoid biosynthetic cluster; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily. | 0.630 |
| AKB63960.1 | rpl2 | MSMAS_0764 | MSMAS_2557 | 3'-to-5' exoribonuclease RNase R. | LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.737 |
| AKB63960.1 | rpl23 | MSMAS_0764 | MSMAS_2558 | 3'-to-5' exoribonuclease RNase R. | LSU ribosomal protein L23Ae (L23p); Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.604 |
| AKB63960.1 | rps15 | MSMAS_0764 | MSMAS_2620 | 3'-to-5' exoribonuclease RNase R. | SSU ribosomal protein S13e (S15p). | 0.721 |
| AKB64392.1 | AKB63225.1 | MSMAS_1196 | MSMAS_0029 | Metallo-beta-lactamase. | Metallo-beta-lactamase. | 0.908 |
| AKB64392.1 | rnj | MSMAS_1196 | MSMAS_2913 | Metallo-beta-lactamase. | Putative Zn-dependent hydrolase in polyisoprenoid biosynthetic cluster; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily. | 0.726 |
| AKB65361.1 | AKB63960.1 | MSMAS_2165 | MSMAS_0764 | Putative ribosomal RNA small subunit methyltransferase A; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 3'-to-5' exoribonuclease RNase R. | 0.857 |
| AKB65361.1 | rnj | MSMAS_2165 | MSMAS_2913 | Putative ribosomal RNA small subunit methyltransferase A; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Putative Zn-dependent hydrolase in polyisoprenoid biosynthetic cluster; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily. | 0.555 |
| AKB65361.1 | rpl2 | MSMAS_2165 | MSMAS_2557 | Putative ribosomal RNA small subunit methyltransferase A; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.947 |
| AKB65361.1 | rps15 | MSMAS_2165 | MSMAS_2620 | Putative ribosomal RNA small subunit methyltransferase A; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | SSU ribosomal protein S13e (S15p). | 0.919 |
| AKB66108.1 | AKB63709.1 | MSMAS_2912 | MSMAS_0513 | Geranylfarnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Geranylfarnesyl diphosphate synthetase; Belongs to the FPP/GGPP synthase family. | 0.916 |
| AKB66108.1 | rnj | MSMAS_2912 | MSMAS_2913 | Geranylfarnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Putative Zn-dependent hydrolase in polyisoprenoid biosynthetic cluster; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily. | 0.934 |
| AKB66108.1 | rpl2 | MSMAS_2912 | MSMAS_2557 | Geranylfarnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.579 |
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