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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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[Homology]
Score
AKB66170.1Protease. (868 aa)    
Predicted Functional Partners:
AKB66171.1
Deoxynucleoside 5'-monophosphate N-glycosidase; Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5-phosphate and a purine or pyrimidine base; Belongs to the 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 family.
       0.928
AKB65409.1
NADH-quinone oxidoreductase subunit C/D.
  
   0.839
AKB65410.1
NADH-quinone oxidoreductase subunit C/D.
  
   0.839
AKB66172.1
Hypothetical protein.
       0.735
AKB66169.1
Ergot alkaloid biosynthesis protein, family.
   
 
 0.729
AKB63432.1
Hydrogenase, group 4, HycE subunit, putative.
  
   0.491
pcm
Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
  
   0.484
AKB65412.1
Hypothetical protein.
  
 
 0.478
AKB65572.1
Energy-conserving hydrogenase (ferredoxin), subunit F.
  
 
 0.478
fpoH
FPO subunit H; FPO shuttles electrons from F(420)H(2), via FAD and iron- sulfur (Fe-S) centers, to quinones in the F(420)H(2):heterodisulfide oxidoreduction chain. The immediate electron acceptor for the enzyme in this species is believed to be methanophenazine. Couples the redox reaction to proton translocation (for every two electrons transferred, 0.9 hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
   0.456
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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