STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66171.1Deoxynucleoside 5'-monophosphate N-glycosidase; Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5-phosphate and a purine or pyrimidine base; Belongs to the 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 family. (149 aa)    
Predicted Functional Partners:
AKB66170.1
Protease.
       0.739
AKB63582.1
Matrixin.
  
     0.597
AKB64927.1
Hypothetical protein.
  
     0.593
AKB66172.1
Hypothetical protein.
       0.547
AKB64546.1
Phytoene dehydrogenase.
  
     0.500
AKB66169.1
Ergot alkaloid biosynthesis protein, family.
       0.452
AKB65210.1
Phytoene dehydrogenase.
  
     0.436
AKB66515.1
Signal peptidase I.
  
     0.408
AKB64762.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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