msrB protein (Methanosarcina mazei) - STRING interaction network

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Predicted Interactions

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Score

msrB

Peptide methionine sulfoxide reductase MsrB. (140 aa)

Predicted Functional Partners:

msrA

0.994

rpl11

0.710

rps9

0.695

rpl22

0.687

rpl24

0.666

AKB65756.1

0.663

rpl15

0.658

rps15

0.652

rps5

0.650

rpl13

0.643

Your Current Organism:

Methanosarcina mazei

NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKB65756.1	msrB	MSMAS_2560	MSMAS_3036	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Peptide methionine sulfoxide reductase MsrB.	0.663
AKB65756.1	rpl11	MSMAS_2560	MSMAS_0289	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L12e (L11p); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.	0.999
AKB65756.1	rpl13	MSMAS_2560	MSMAS_2922	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L13Ae (L13p); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
AKB65756.1	rpl15	MSMAS_2560	MSMAS_2538	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L27Ae (L15p); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
AKB65756.1	rpl22	MSMAS_2560	MSMAS_2555	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L17e (L22p); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.999
AKB65756.1	rpl24	MSMAS_2560	MSMAS_2549	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L26e (L24p); Located at the polypeptide exit tunnel on the outside of the subunit.	0.999
AKB65756.1	rps15	MSMAS_2560	MSMAS_2620	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S13e (S15p).	0.999
AKB65756.1	rps5	MSMAS_2560	MSMAS_2540	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy.	0.999
AKB65756.1	rps9	MSMAS_2560	MSMAS_2921	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S16e (S9p); Belongs to the universal ribosomal protein uS9 family.	0.999
msrA	msrB	MSMAS_2300	MSMAS_3036	Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.	Peptide methionine sulfoxide reductase MsrB.	0.994
msrA	rps9	MSMAS_2300	MSMAS_2921	Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.	SSU ribosomal protein S16e (S9p); Belongs to the universal ribosomal protein uS9 family.	0.417
msrB	AKB65756.1	MSMAS_3036	MSMAS_2560	Peptide methionine sulfoxide reductase MsrB.	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.663
msrB	msrA	MSMAS_3036	MSMAS_2300	Peptide methionine sulfoxide reductase MsrB.	Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.	0.994
msrB	rpl11	MSMAS_3036	MSMAS_0289	Peptide methionine sulfoxide reductase MsrB.	LSU ribosomal protein L12e (L11p); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.	0.710
msrB	rpl13	MSMAS_3036	MSMAS_2922	Peptide methionine sulfoxide reductase MsrB.	LSU ribosomal protein L13Ae (L13p); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.643
msrB	rpl15	MSMAS_3036	MSMAS_2538	Peptide methionine sulfoxide reductase MsrB.	LSU ribosomal protein L27Ae (L15p); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.658
msrB	rpl22	MSMAS_3036	MSMAS_2555	Peptide methionine sulfoxide reductase MsrB.	LSU ribosomal protein L17e (L22p); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.687
msrB	rpl24	MSMAS_3036	MSMAS_2549	Peptide methionine sulfoxide reductase MsrB.	LSU ribosomal protein L26e (L24p); Located at the polypeptide exit tunnel on the outside of the subunit.	0.666
msrB	rps15	MSMAS_3036	MSMAS_2620	Peptide methionine sulfoxide reductase MsrB.	SSU ribosomal protein S13e (S15p).	0.652
msrB	rps5	MSMAS_3036	MSMAS_2540	Peptide methionine sulfoxide reductase MsrB.	SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy.	0.650