STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66244.1Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family. (355 aa)    
Predicted Functional Partners:
map
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase archaeal type 2 subfamily.
   
 
 0.706
AKB66420.1
Ferredoxin.
 
    0.690
AKB63426.1
Ferredoxin.
 
    0.689
rps14
SSU ribosomal protein S29e (S14p); Binds 16S rRNA, required for the assembly of 30S particles.
  
 
 0.679
AKB66525.1
Zinc ABC transporter, periplasmic-binding protein ZnuA.
  
  
 0.661
mptA
GTP cyclohydrolase I type 2; Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin.
  
  
 0.652
AKB66421.1
Methylcobalamin:coenzyme M methyltransferase, methylamine-specific.
 
  
 0.528
AKB65469.1
Methylcobalamin:coenzyme M methyltransferase, methanol-specific.
 
  
 0.508
AKB66264.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
 
  
 0.498
AKB66263.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
 
  
 0.497
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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