STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66267.1Hypothetical protein. (135 aa)    
Predicted Functional Partners:
AKB66268.1
Putative transporter PduT for various metalloporphyrins.
 
    0.984
AKB66269.1
Hypothetical protein.
 
     0.967
AKB66263.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
 
    0.812
AKB66264.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
 
    0.752
AKB65878.1
CobN component of cobalt chelatase involved in B12 biosynthesis.
 
    0.644
mptA
GTP cyclohydrolase I type 2; Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin.
  
    0.540
AKB66266.1
Metal transporter, ZIP family.
     
 0.501
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.