STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB66268.1Putative transporter PduT for various metalloporphyrins. (207 aa)    
Predicted Functional Partners:
AKB66269.1
Hypothetical protein.
 
    0.988
AKB66267.1
Hypothetical protein.
 
    0.984
AKB66263.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
 
  
 0.872
AKB66264.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
 
  
 0.822
AKB65878.1
CobN component of cobalt chelatase involved in B12 biosynthesis.
 
  
 0.747
AKB66266.1
Metal transporter, ZIP family.
  
  
 0.615
AKB65502.1
Hypothetical protein.
 
  
 0.593
AKB66524.1
Zinc ABC transporter, ATP-binding protein ZnuC.
  
  
 0.527
AKB65118.1
Asparagine synthetase (glutamine-hydrolyzing).
  
  
 0.504
AKB65815.1
Iron(III) dicitrate transport ATP-binding protein.
  
  
 0.504
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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