STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66268.1Putative transporter PduT for various metalloporphyrins. (207 aa)    
Predicted Functional Partners:
AKB66269.1
Hypothetical protein.
 
    0.955
AKB66267.1
Hypothetical protein.
 
  
 0.945
AKB66263.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
 
  
 0.845
AKB66264.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
 
  
 0.836
AKB65878.1
CobN component of cobalt chelatase involved in B12 biosynthesis.
 
  
 0.767
AKB65502.1
Hypothetical protein.
 
  
 0.622
AKB65118.1
Asparagine synthetase (glutamine-hydrolyzing).
  
  
 0.579
AKB65815.1
Iron(III) dicitrate transport ATP-binding protein.
  
  
 0.574
AKB66266.1
Metal transporter, ZIP family.
  
  
 0.572
AKB65814.1
Iron(III) dicitrate transport system permease protein.
  
  
 0.548
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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