STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66269.1Hypothetical protein. (230 aa)    
Predicted Functional Partners:
AKB66268.1
Putative transporter PduT for various metalloporphyrins.
 
    0.955
AKB66267.1
Hypothetical protein.
 
     0.880
AKB65597.1
Hypothetical protein.
  
    0.601
AKB63830.1
Putative methanogenesis marker protein 12; Belongs to the UPF0285 family.
  
     0.564
AKB66263.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
 
    0.561
AKB66237.1
Hypothetical protein.
  
     0.557
AKB63882.1
Transposase.
  
     0.540
AKB66264.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
 
    0.532
AKB66020.1
Hypothetical protein.
  
     0.531
AKB64865.1
Hypothetical protein.
  
    0.524
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.