STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66281.1Nitroreductase family protein. (174 aa)    
Predicted Functional Partners:
AKB66282.1
Hypothetical protein.
 
    0.705
AKB66283.1
Iron-sulfur flavoprotein.
 
 
 0.690
AKB66280.1
Iron-sulfur flavoprotein.
 
 
 0.683
AKB66284.1
Glutathione-regulated potassium-efflux system ancillary protein KefG.
  
 
 0.549
AKB66404.1
Hypothetical protein.
  
  
 0.530
AKB64995.1
Flavoredoxin Flr.
 
 
 0.498
mer
5,10-methylenetetrahydromethanopterin reductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family.
 
 
 0.490
cofD
2-phospho-L-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP.
 
 
 0.476
AKB64849.1
Lactoylglutathione lyase and related lyase.
  
  
 0.465
AKB66463.1
Lactoylglutation lyase.
  
  
 0.465
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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