STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66299.1Polyferredoxin protein MvhB. (340 aa)    
Predicted Functional Partners:
AKB66296.1
Formylmethanofuran dehydrogenase (molybdenum) subunit D.
 
 0.992
AKB66295.1
Formylmethanofuran dehydrogenase (molybdenum) subunit B.
 
 0.976
AKB66297.1
Formylmethanofuran dehydrogenase (molybdenum) subunit C.
 
 0.974
AKB66298.1
Formylmethanofuran dehydrogenase subunit A.
 
 0.972
ftr
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family.
    
 0.957
AKB64466.1
Tungsten-containing formylmethanofuran dehydrogenase 2 subunit G.
 
0.955
AKB64464.1
Formylmethanofuran dehydrogenase subunit D.
 
 0.926
AKB65895.1
Formylmethanofuran dehydrogenase (tungsten) subunit D.
 
 0.918
AKB63766.1
Threonine dehydrogenase and related Zn-dependent dehydrogenase.
     
  0.900
AKB65898.1
Formylmethanofuran dehydrogenase subunit C.
 
 0.866
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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