STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB66336.1Citrate synthase (si). (355 aa)    
Predicted Functional Partners:
AKB65912.1
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.999
AKB66335.1
Aconitate hydratase.
 
 0.999
AKB64705.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
 0.987
AKB63631.1
Beta-ketoacyl synthase/thiolase.
  
 0.981
AKB64080.1
2-oxoglutarate oxidoreductase, beta subunit.
    
 0.969
AKB66518.1
Pyruvate:ferredoxin oxidoreductase, delta subunit.
    
 0.963
AKB66520.1
Pyruvate:ferredoxin oxidoreductase, beta subunit.
    
 0.956
AKB64079.1
2-oxoglutarate oxidoreductase, alpha subunit.
    
 0.946
AKB66519.1
Pyruvate:ferredoxin oxidoreductase, alpha subunit.
    
 0.946
AKB66517.1
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
    
 0.941
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.