Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB66376.1Acetyltransferase (GNAT) family protein. (324 aa)    
Predicted Functional Partners:
AKB65678.1
Hypothetical protein.
  
     0.696
AKB66377.1
Hypothetical protein.
 
  
 0.691
AKB65021.1
Hypothetical protein.
  
     0.662
AKB63933.1
Hypothetical protein.
  
     0.649
rpl2
LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
   
   0.644
AKB65210.1
Phytoene dehydrogenase.
  
     0.617
AKB64758.1
Hypothetical protein.
 
     0.561
AKB65131.1
Molybdopterin-guanine dinucleotide biosynthesis protein MobB.
  
 
 
 0.540
AKB63247.1
Hypothetical protein.
  
     0.532
AKB64494.1
Hypothetical protein.
  
     0.528
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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