STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB66396.1Hypothetical protein. (211 aa)    
Predicted Functional Partners:
AKB66397.1
Hypothetical protein.
 
     0.923
AKB64582.1
Hypothetical protein.
 
     0.725
AKB65077.1
Hypothetical protein.
 
     0.725
AKB65289.1
Hypothetical protein.
 
     0.725
AKB65887.1
Hypothetical protein.
 
     0.725
AKB66057.1
Hypothetical protein.
 
     0.725
AKB64970.1
Hypothetical protein.
 
     0.614
AKB64648.1
Mobile element protein.
  
     0.562
AKB64827.1
Mobile element protein.
  
     0.562
AKB65994.1
Mobile element protein.
  
     0.562
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.