STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66404.1Hypothetical protein. (424 aa)    
Predicted Functional Partners:
AKB66405.1
Hypothetical protein.
 
  
 0.945
AKB63269.1
Methyl coenzyme M reductase alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis.
 
   
 0.721
AKB63268.1
Methyl coenzyme M reductase gamma subunit.
 
   
 0.712
AKB63589.1
Putative methanogenesis marker protein 3; Belongs to the UPF0288 family.
 
   
 0.704
AKB63584.1
Putative methanogenesis marker protein 7.
 
     0.699
AKB63267.1
Methyl coenzyme M reductase operon protein C.
 
     0.698
AKB63588.1
Putative methanogenesis marker protein 6.
 
     0.698
AKB63265.1
Methyl coenzyme M reductase beta subunit.
 
     0.688
AKB63587.1
Putative methanogenesis marker protein 5.
 
     0.684
AKB63266.1
Methyl coenzyme M reductase operon protein D.
 
     0.682
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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