Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKB66420.1Ferredoxin. (540 aa)    
Predicted Functional Partners:
AKB66421.1
Methylcobalamin:coenzyme M methyltransferase, methylamine-specific.
 
  
 0.850
AKB63427.1
Methylcobalamin:coenzyme M methyltransferase, methanol-specific.
 
  
 0.755
AKB65469.1
Methylcobalamin:coenzyme M methyltransferase, methanol-specific.
 
  
 0.738
AKB63997.1
Methylcobamide:CoM methyltransferase MtaA.
 
  
 0.737
AKB64321.1
Methylcobalamin:coenzyme M methyltransferase, methanol-specific.
 
  
 0.737
AKB65901.1
Hypothetical protein.
 
     0.722
AKB63425.1
Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family.
 
    0.721
AKB66244.1
Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family.
 
    0.721
AKB65948.1
Methylcobamide:CoM methyltransferase MtaA.
 
  
 0.719
AKB63423.1
Methanol:corrinoid methyltransferase.
 
     0.676
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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