STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66421.1Methylcobalamin:coenzyme M methyltransferase, methylamine-specific. (339 aa)    
Predicted Functional Partners:
AKB65832.1
Trimethylamine:corrinoid methyltransferase; Pyrrolysine-containing; Belongs to the trimethylamine methyltransferase family.
 
  
 0.978
AKB66422.1
Monomethylamine methyltransferase corrinoid protein.
 
 0.955
AKB63440.1
Corrinoid methyltransferase protein.
 
 
 0.954
AKB65833.1
Trimethylamine methyltransferase corrinoid protein.
 
 0.954
AKB66179.1
Trimethylamine methyltransferase corrinoid protein.
 
 0.954
AKB64943.1
Dimethylamine methyltransferase corrinoid protein.
 
 0.952
AKB65830.1
Dimethylamine methyltransferase corrinoid protein.
 
 0.952
AKB64942.1
Dimethylamine:corrinoid methyltransferase; Pyrrolysine-containing.
    
 0.947
AKB65831.1
Dimethylamine:corrinoid methyltransferase; Pyrrolysine-containing.
    
 0.947
AKB66176.1
Dimethylamine:corrinoid methyltransferase; Pyrrolysine-containing.
    
 0.947
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.