STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66463.1Lactoylglutation lyase. (154 aa)    
Predicted Functional Partners:
AKB64310.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
 0.687
fni
Isopentenyl-diphosphate delta-isomerase, FMN-dependent; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 
 0.659
AKB63220.1
FAD/FMN-containing dehydrogenase.
    
 0.657
AKB64722.1
6-aminohexanoate-dimer hydrolase.
 
 
 0.652
AKB64392.1
Metallo-beta-lactamase.
 
 
 0.636
AKB64655.1
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.627
AKB65412.1
Hypothetical protein.
  
  
 0.618
AKB65572.1
Energy-conserving hydrogenase (ferredoxin), subunit F.
  
  
 0.618
AKB65041.1
L-sorbosone dehydrogenase.
  
 
  0.612
AKB65409.1
NADH-quinone oxidoreductase subunit C/D.
  
  
 0.612
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.