STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66485.1Alpha/beta superfamily. (326 aa)    
Predicted Functional Partners:
secG
Preprotein translocase subunit SecG; Involved in protein export. The function of the beta subunit is unknown, but it may be involved in stabilization of the trimeric complex.
       0.709
mutS2
DNA mismatch repair protein; Has ATPase and non-specific DNA-binding activities. Belongs to the DNA mismatch repair MutS family. Archaeal Muts2 subfamily.
 
     0.671
AKB63857.1
Glycosyltransferase.
 
 
 
 0.669
AKB63918.1
Hypothetical protein.
 
 
 
 0.667
AKB63325.1
Glycosyl transferase, group 1.
   
 
 0.603
AKB63327.1
Glycosyltransferase.
   
 
 0.603
AKB63355.1
Glycosyltransferase.
   
 
 0.603
AKB63356.1
Lipid carrier : UDP-N-acetylgalactosaminyltransferase; Alpha-1,3-N-acetylgalactosamine transferase PglA; Putative glycosyltransferase.
   
 
 0.603
AKB63362.1
Glycosyltransferase.
   
 
 0.603
AKB63363.1
Glycosyltransferase.
   
 
 0.603
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.