STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66492.1Ribonucleotide reductase of class III (anaerobic), activating protein. (263 aa)    
Predicted Functional Partners:
AKB66491.1
Ribonucleotide reductase of class III (anaerobic), large subunit.
 
  
 0.978
AKB66490.1
Glutaredoxin-like protein.
     
 0.881
AKB64888.1
Anaerobic ribonucleoside-triphosphate reductase activating protein.
    
 0.796
AKB63568.1
Lysine 2,3-aminomutase.
      
 0.751
AKB65153.1
Alcohol dehydrogenase.
  
 
 0.685
AKB63198.1
Dephospho-CoA kinase archaeal, predicted; Belongs to the UPF0200 family.
       0.560
hisC
Aspartate aminotransferase / Histidinol-phosphate aminotransferase.
 
  
 0.549
moaA
Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
  
  
 0.493
AKB66519.1
Pyruvate:ferredoxin oxidoreductase, alpha subunit.
 
  
 0.468
AKB64545.1
Hypothetical protein.
  
  
 0.435
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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