STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66492.1Ribonucleotide reductase of class III (anaerobic), activating protein. (263 aa)    
Predicted Functional Partners:
AKB66491.1
Ribonucleotide reductase of class III (anaerobic), large subunit.
 
  
 0.925
AKB65153.1
Alcohol dehydrogenase.
  
 
 0.755
AKB66490.1
Glutaredoxin-like protein.
     
 0.558
AKB63664.1
Aldehyde dehydrogenase.
  
 
 0.514
AKB64476.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.514
AKB65555.1
Succinate-semialdehyde dehydrogenase [NADP+].
  
 
 0.514
AKB66519.1
Pyruvate:ferredoxin oxidoreductase, alpha subunit.
 
  
 0.514
AKB66336.1
Citrate synthase (si).
    
 0.479
AKB66517.1
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
 
  
 0.476
AKB66518.1
Pyruvate:ferredoxin oxidoreductase, delta subunit.
 
  
 0.463
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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