Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
AKB66498.1ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. (263 aa)    
Predicted Functional Partners:
AKB66496.1
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component.
 
 0.999
AKB66497.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 0.999
AKB65882.1
ABC transporter, ATP-binding protein.
 
0.864
AKB63786.1
Molybdenum transport system permease protein ModB; TCDB 3.A.1.8.1.
  
 0.852
AKB65058.1
ABC transporter, ATP-binding protein.
 
0.741
AKB64580.1
PUA-PAPS reductase like fusion.
 
  
 0.736
AKB66024.1
Oligopeptide transport system permease protein OppB; TCDB 3.A.1.5.1.
    
0.733
AKB66495.1
Putative transcriptional regulator with an HTH domain protein.
 
     0.674
AKB64555.1
Oligopeptide transport system permease protein OppB; TCDB 3.A.1.5.1.
    
0.603
AKB65450.1
ABC transporter, ATP-binding protein.
 
0.562
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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