Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKB64073.1 | AKB65756.1 | MSMAS_0877 | MSMAS_2560 | RNase L inhibitor. | LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.894 |
| AKB64073.1 | prf1 | MSMAS_0877 | MSMAS_3316 | RNase L inhibitor. | Eukaryotic peptide chain release factor subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. | 0.973 |
| AKB64073.1 | rpl10 | MSMAS_0877 | MSMAS_0287 | RNase L inhibitor. | LSU ribosomal protein P0 (L10p); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.920 |
| AKB64073.1 | rpl15e | MSMAS_0877 | MSMAS_2092 | RNase L inhibitor. | LSU ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.920 |
| AKB64073.1 | rpl19e | MSMAS_0877 | MSMAS_2542 | RNase L inhibitor. | LSU ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.890 |
| AKB64073.1 | rpl2 | MSMAS_0877 | MSMAS_2557 | RNase L inhibitor. | LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.999 |
| AKB64073.1 | rps15 | MSMAS_0877 | MSMAS_2620 | RNase L inhibitor. | SSU ribosomal protein S13e (S15p). | 0.955 |
| AKB64073.1 | rps3ae | MSMAS_0877 | MSMAS_1115 | RNase L inhibitor. | SSU ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.961 |
| AKB64073.1 | rps4e | MSMAS_0877 | MSMAS_2548 | RNase L inhibitor. | SSU ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.961 |
| AKB64073.1 | tuf | MSMAS_0877 | MSMAS_2431 | RNase L inhibitor. | Translation elongation factor 1 alpha subunit; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. | 0.596 |
| AKB65756.1 | AKB64073.1 | MSMAS_2560 | MSMAS_0877 | LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | RNase L inhibitor. | 0.894 |
| AKB65756.1 | prf1 | MSMAS_2560 | MSMAS_3316 | LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Eukaryotic peptide chain release factor subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. | 0.888 |
| AKB65756.1 | rpl10 | MSMAS_2560 | MSMAS_0287 | LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | LSU ribosomal protein P0 (L10p); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
| AKB65756.1 | rpl15e | MSMAS_2560 | MSMAS_2092 | LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | LSU ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.999 |
| AKB65756.1 | rpl19e | MSMAS_2560 | MSMAS_2542 | LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | LSU ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.999 |
| AKB65756.1 | rpl2 | MSMAS_2560 | MSMAS_2557 | LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.999 |
| AKB65756.1 | rps15 | MSMAS_2560 | MSMAS_2620 | LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | SSU ribosomal protein S13e (S15p). | 0.999 |
| AKB65756.1 | rps3ae | MSMAS_2560 | MSMAS_1115 | LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | SSU ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.999 |
| AKB65756.1 | rps4e | MSMAS_2560 | MSMAS_2548 | LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | SSU ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.999 |
| AKB65756.1 | tuf | MSMAS_2560 | MSMAS_2431 | LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Translation elongation factor 1 alpha subunit; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. | 0.923 |
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