STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66524.1Zinc ABC transporter, ATP-binding protein ZnuC. (254 aa)    
Predicted Functional Partners:
AKB66523.1
Zinc ABC transporter, inner membrane permease protein ZnuB.
 
 0.999
AKB66525.1
Zinc ABC transporter, periplasmic-binding protein ZnuA.
 
 
 0.999
AKB66526.1
Putative zinc-dependent repressor ZntR, DtxR superfamily.
  
 
 0.771
AKB63461.1
Iron-dependent repressor IdeR/DtxR.
  
 
 0.657
AKB65329.1
Iron-dependent repressor IdeR/DtxR.
  
 
 0.654
AKB66382.1
Hypothetical protein.
  
 
 0.654
AKB66496.1
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component.
  
 
 0.596
AKB66268.1
Putative transporter PduT for various metalloporphyrins.
  
  
 0.524
AKB65473.1
Superoxide dismutase (Mn/Fe); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
 
   
 0.444
corA
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
 
   
 0.432
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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