STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB66527.1Putative permease. (445 aa)    
Predicted Functional Partners:
AKB66528.1
Positive regulator of CheA protein activity (CheW).
     
 0.594
AKB66526.1
Putative zinc-dependent repressor ZntR, DtxR superfamily.
 
     0.511
AKB64748.1
Fructokinase.
 
  
 0.507
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
  
 0.480
AKB64310.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
  
 0.459
moaC
Molybdenum cofactor biosynthesis enzyme; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
   
 0.420
AKB64554.1
Proton/glutamate symport protein / Sodium/glutamate symport protein.
 
   
 0.408
AKB65537.1
Cytidine kinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.405
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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