Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE27112.1 | SHE27121.1 | SAMN02745204_00020 | SAMN02745204_00021 | Phenazine biosynthesis protein PhzF family. | Aspartate kinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.503 |
SHE27112.1 | SHE27126.1 | SAMN02745204_00020 | SAMN02745204_00022 | Phenazine biosynthesis protein PhzF family. | Hypothetical protein. | 0.540 |
SHE27112.1 | SHF33056.1 | SAMN02745204_00020 | SAMN02745204_02280 | Phenazine biosynthesis protein PhzF family. | Carboxymethylenebutenolidase. | 0.413 |
SHE27112.1 | murD | SAMN02745204_00020 | SAMN02745204_00023 | Phenazine biosynthesis protein PhzF family. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.456 |
SHE27121.1 | SHE27112.1 | SAMN02745204_00021 | SAMN02745204_00020 | Aspartate kinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Phenazine biosynthesis protein PhzF family. | 0.503 |
SHE27121.1 | SHE27126.1 | SAMN02745204_00021 | SAMN02745204_00022 | Aspartate kinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Hypothetical protein. | 0.913 |
SHE27121.1 | murD | SAMN02745204_00021 | SAMN02745204_00023 | Aspartate kinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.924 |
SHE27126.1 | SHE27112.1 | SAMN02745204_00022 | SAMN02745204_00020 | Hypothetical protein. | Phenazine biosynthesis protein PhzF family. | 0.540 |
SHE27126.1 | SHE27121.1 | SAMN02745204_00022 | SAMN02745204_00021 | Hypothetical protein. | Aspartate kinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.913 |
SHE27126.1 | murD | SAMN02745204_00022 | SAMN02745204_00023 | Hypothetical protein. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.998 |
SHF33056.1 | SHE27112.1 | SAMN02745204_02280 | SAMN02745204_00020 | Carboxymethylenebutenolidase. | Phenazine biosynthesis protein PhzF family. | 0.413 |
murD | SHE27112.1 | SAMN02745204_00023 | SAMN02745204_00020 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | Phenazine biosynthesis protein PhzF family. | 0.456 |
murD | SHE27121.1 | SAMN02745204_00023 | SAMN02745204_00021 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | Aspartate kinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.924 |
murD | SHE27126.1 | SAMN02745204_00023 | SAMN02745204_00022 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | Hypothetical protein. | 0.998 |