STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE27593.1Microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62. (455 aa)    
Predicted Functional Partners:
SHE27570.1
TldD protein.
 
 
0.954
SHE27579.1
Ribosome-associated protein; Belongs to the UPF0307 family.
  
    0.629
SHE27613.1
Uncharacterized conserved protein, DUF1501 family.
       0.559
SHE27603.1
Uncharacterized conserved protein, DUF1800 family.
       0.553
SHE27626.1
Hypothetical protein.
       0.486
Your Current Organism:
Thermomonas hydrothermalis
NCBI taxonomy Id: 213588
Other names: ATCC BAA-470, DSM 14834, T. hydrothermalis, Thermomonas hydrothermalis Alves et al. 2003, strain SGM-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.