Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE27864.1 | SHE30079.1 | SAMN02745204_00092 | SAMN02745204_00152 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Mutator mutT protein; Belongs to the Nudix hydrolase family. | 0.675 |
SHE27864.1 | SHE39793.1 | SAMN02745204_00092 | SAMN02745204_00358 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Phosphate transport system substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.611 |
SHE27864.1 | SHE66315.1 | SAMN02745204_00092 | SAMN02745204_00902 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | AAA domain-containing protein. | 0.678 |
SHE27864.1 | SHF04960.1 | SAMN02745204_00092 | SAMN02745204_01686 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | AAA domain-containing protein. | 0.678 |
SHE27864.1 | SHF22546.1 | SAMN02745204_00092 | SAMN02745204_02057 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Hypothetical protein. | 0.839 |
SHE27864.1 | dnaK | SAMN02745204_00092 | SAMN02745204_01563 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.859 |
SHE27864.1 | folE | SAMN02745204_00092 | SAMN02745204_00550 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | GTP cyclohydrolase I. | 0.916 |
SHE27864.1 | secA | SAMN02745204_00092 | SAMN02745204_00153 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.917 |
SHE27864.1 | secB | SAMN02745204_00092 | SAMN02745204_01709 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Preprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | 0.900 |
SHE27864.1 | tig | SAMN02745204_00092 | SAMN02745204_01603 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.899 |
SHE30079.1 | SHE27864.1 | SAMN02745204_00152 | SAMN02745204_00092 | Mutator mutT protein; Belongs to the Nudix hydrolase family. | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | 0.675 |
SHE30079.1 | SHE39793.1 | SAMN02745204_00152 | SAMN02745204_00358 | Mutator mutT protein; Belongs to the Nudix hydrolase family. | Phosphate transport system substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.530 |
SHE30079.1 | SHF22546.1 | SAMN02745204_00152 | SAMN02745204_02057 | Mutator mutT protein; Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.437 |
SHE30079.1 | secA | SAMN02745204_00152 | SAMN02745204_00153 | Mutator mutT protein; Belongs to the Nudix hydrolase family. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.744 |
SHE39793.1 | SHE27864.1 | SAMN02745204_00358 | SAMN02745204_00092 | Phosphate transport system substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | 0.611 |
SHE39793.1 | SHE30079.1 | SAMN02745204_00358 | SAMN02745204_00152 | Phosphate transport system substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | Mutator mutT protein; Belongs to the Nudix hydrolase family. | 0.530 |
SHE66315.1 | SHE27864.1 | SAMN02745204_00902 | SAMN02745204_00092 | AAA domain-containing protein. | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | 0.678 |
SHE66315.1 | SHF22546.1 | SAMN02745204_00902 | SAMN02745204_02057 | AAA domain-containing protein. | Hypothetical protein. | 0.979 |
SHE66315.1 | dnaK | SAMN02745204_00902 | SAMN02745204_01563 | AAA domain-containing protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.497 |
SHF04960.1 | SHE27864.1 | SAMN02745204_01686 | SAMN02745204_00092 | AAA domain-containing protein. | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | 0.678 |
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