Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE28100.1 | SHE48545.1 | SAMN02745204_00110 | SAMN02745204_00523 | Effector-binding domain-containing protein. | Uncharacterized conserved protein HemY, contains two TPR repeats. | 0.724 |
SHE28100.1 | SHE52966.1 | SAMN02745204_00110 | SAMN02745204_00620 | Effector-binding domain-containing protein. | Restriction endonuclease. | 0.729 |
SHE28100.1 | SHE53099.1 | SAMN02745204_00110 | SAMN02745204_00624 | Effector-binding domain-containing protein. | FHA domain-containing protein. | 0.755 |
SHE28100.1 | SHE54974.1 | SAMN02745204_00110 | SAMN02745204_00676 | Effector-binding domain-containing protein. | 4-amino-4-deoxy-L-arabinose transferase. | 0.703 |
SHE28100.1 | SHE57438.1 | SAMN02745204_00110 | SAMN02745204_00720 | Effector-binding domain-containing protein. | Protein of unknown function. | 0.665 |
SHE28100.1 | SHE74100.1 | SAMN02745204_00110 | SAMN02745204_01042 | Effector-binding domain-containing protein. | Hypothetical protein. | 0.755 |
SHE28100.1 | SHE83046.1 | SAMN02745204_00110 | SAMN02745204_01232 | Effector-binding domain-containing protein. | TonB family C-terminal domain-containing protein. | 0.728 |
SHE28100.1 | SHE86560.1 | SAMN02745204_00110 | SAMN02745204_01293 | Effector-binding domain-containing protein. | Hypothetical protein. | 0.744 |
SHE28100.1 | SHE94919.1 | SAMN02745204_00110 | SAMN02745204_01467 | Effector-binding domain-containing protein. | O-antigen ligase. | 0.707 |
SHE28100.1 | SHF06326.1 | SAMN02745204_00110 | SAMN02745204_01711 | Effector-binding domain-containing protein. | Sulfation-dependent quorum factor, Ax21 family. | 0.751 |
SHE48545.1 | SHE28100.1 | SAMN02745204_00523 | SAMN02745204_00110 | Uncharacterized conserved protein HemY, contains two TPR repeats. | Effector-binding domain-containing protein. | 0.724 |
SHE48545.1 | SHE52966.1 | SAMN02745204_00523 | SAMN02745204_00620 | Uncharacterized conserved protein HemY, contains two TPR repeats. | Restriction endonuclease. | 0.752 |
SHE48545.1 | SHE53099.1 | SAMN02745204_00523 | SAMN02745204_00624 | Uncharacterized conserved protein HemY, contains two TPR repeats. | FHA domain-containing protein. | 0.774 |
SHE48545.1 | SHE54974.1 | SAMN02745204_00523 | SAMN02745204_00676 | Uncharacterized conserved protein HemY, contains two TPR repeats. | 4-amino-4-deoxy-L-arabinose transferase. | 0.686 |
SHE48545.1 | SHE57438.1 | SAMN02745204_00523 | SAMN02745204_00720 | Uncharacterized conserved protein HemY, contains two TPR repeats. | Protein of unknown function. | 0.696 |
SHE48545.1 | SHE74100.1 | SAMN02745204_00523 | SAMN02745204_01042 | Uncharacterized conserved protein HemY, contains two TPR repeats. | Hypothetical protein. | 0.724 |
SHE48545.1 | SHE83046.1 | SAMN02745204_00523 | SAMN02745204_01232 | Uncharacterized conserved protein HemY, contains two TPR repeats. | TonB family C-terminal domain-containing protein. | 0.668 |
SHE48545.1 | SHE86560.1 | SAMN02745204_00523 | SAMN02745204_01293 | Uncharacterized conserved protein HemY, contains two TPR repeats. | Hypothetical protein. | 0.763 |
SHE48545.1 | SHE94919.1 | SAMN02745204_00523 | SAMN02745204_01467 | Uncharacterized conserved protein HemY, contains two TPR repeats. | O-antigen ligase. | 0.770 |
SHE48545.1 | SHF06326.1 | SAMN02745204_00523 | SAMN02745204_01711 | Uncharacterized conserved protein HemY, contains two TPR repeats. | Sulfation-dependent quorum factor, Ax21 family. | 0.751 |
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