Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE39532.1 | SHE39570.1 | SAMN02745204_00351 | SAMN02745204_00352 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0276 family. | 0.980 |
SHE39532.1 | SHE39603.1 | SAMN02745204_00351 | SAMN02745204_00353 | Hypothetical protein. | EF hand. | 0.801 |
SHE39532.1 | SHE39645.1 | SAMN02745204_00351 | SAMN02745204_00354 | Hypothetical protein. | Phosphate transport system protein; Plays a role in the regulation of phosphate uptake. | 0.555 |
SHE39532.1 | SHE39725.1 | SAMN02745204_00351 | SAMN02745204_00356 | Hypothetical protein. | Phosphate transport system permease protein. | 0.514 |
SHE39532.1 | SHE39763.1 | SAMN02745204_00351 | SAMN02745204_00357 | Hypothetical protein. | Phosphate transport system permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.514 |
SHE39532.1 | pstB | SAMN02745204_00351 | SAMN02745204_00355 | Hypothetical protein. | Phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.551 |
SHE39532.1 | rnt | SAMN02745204_00351 | SAMN02745204_00350 | Hypothetical protein. | Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. | 0.704 |
SHE39570.1 | SHE39532.1 | SAMN02745204_00352 | SAMN02745204_00351 | Hypothetical protein; Belongs to the UPF0276 family. | Hypothetical protein. | 0.980 |
SHE39570.1 | SHE39603.1 | SAMN02745204_00352 | SAMN02745204_00353 | Hypothetical protein; Belongs to the UPF0276 family. | EF hand. | 0.779 |
SHE39570.1 | SHE39645.1 | SAMN02745204_00352 | SAMN02745204_00354 | Hypothetical protein; Belongs to the UPF0276 family. | Phosphate transport system protein; Plays a role in the regulation of phosphate uptake. | 0.551 |
SHE39570.1 | SHE39725.1 | SAMN02745204_00352 | SAMN02745204_00356 | Hypothetical protein; Belongs to the UPF0276 family. | Phosphate transport system permease protein. | 0.512 |
SHE39570.1 | SHE39763.1 | SAMN02745204_00352 | SAMN02745204_00357 | Hypothetical protein; Belongs to the UPF0276 family. | Phosphate transport system permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.512 |
SHE39570.1 | pstB | SAMN02745204_00352 | SAMN02745204_00355 | Hypothetical protein; Belongs to the UPF0276 family. | Phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.548 |
SHE39570.1 | rnt | SAMN02745204_00352 | SAMN02745204_00350 | Hypothetical protein; Belongs to the UPF0276 family. | Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. | 0.653 |
SHE39603.1 | SHE39532.1 | SAMN02745204_00353 | SAMN02745204_00351 | EF hand. | Hypothetical protein. | 0.801 |
SHE39603.1 | SHE39570.1 | SAMN02745204_00353 | SAMN02745204_00352 | EF hand. | Hypothetical protein; Belongs to the UPF0276 family. | 0.779 |
SHE39603.1 | SHE39645.1 | SAMN02745204_00353 | SAMN02745204_00354 | EF hand. | Phosphate transport system protein; Plays a role in the regulation of phosphate uptake. | 0.602 |
SHE39603.1 | SHE39725.1 | SAMN02745204_00353 | SAMN02745204_00356 | EF hand. | Phosphate transport system permease protein. | 0.543 |
SHE39603.1 | SHE39763.1 | SAMN02745204_00353 | SAMN02745204_00357 | EF hand. | Phosphate transport system permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.543 |
SHE39603.1 | pstB | SAMN02745204_00353 | SAMN02745204_00355 | EF hand. | Phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.601 |
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