STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE44986.1MFS transporter, FHS family, L-fucose permease. (482 aa)    
Predicted Functional Partners:
SHE74651.1
MFS transporter, NHS family, xanthosine permease.
 
    0.597
SHE45092.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
  
     0.588
SHE44951.1
ATP-dependent DNA helicase UvrD.
       0.515
SHE89950.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.496
SHE34778.1
Maltose/moltooligosaccharide transporter.
 
    0.475
SHE70811.1
CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.442
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
    
  0.439
SHE82010.1
N-acetylglucosamine-6-phosphate deacetylase.
 
   
 0.420
Your Current Organism:
Thermomonas hydrothermalis
NCBI taxonomy Id: 213588
Other names: ATCC BAA-470, DSM 14834, T. hydrothermalis, Thermomonas hydrothermalis Alves et al. 2003, strain SGM-6
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