STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE77077.1Glycosyl transferase family 2. (283 aa)    
Predicted Functional Partners:
SHE77182.1
General secretion pathway protein M.
 
     0.930
SHE77207.1
General secretion pathway protein L.
 
     0.897
SHE77317.1
General secretion pathway protein H.
 
     0.869
SHE77236.1
General secretion pathway protein K.
 
     0.866
SHE77289.1
General secretion pathway protein I.
 
     0.855
SHE77118.1
General secretion pathway protein D.
 
     0.845
SHE77261.1
General secretion pathway protein J.
 
     0.805
SHE77040.1
Hypothetical protein.
 
     0.792
SHE77149.1
General secretion pathway protein N.
       0.778
SHE77342.1
General secretion pathway protein G.
       0.737
Your Current Organism:
Thermomonas hydrothermalis
NCBI taxonomy Id: 213588
Other names: ATCC BAA-470, DSM 14834, T. hydrothermalis, Thermomonas hydrothermalis Alves et al. 2003, strain SGM-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.