STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE80282.1Protein of unknown function. (152 aa)    
Predicted Functional Partners:
SHE80165.1
Oxygen tolerance.
 
   
 0.953
SHE80206.1
Ca-activated chloride channel family protein.
 
     0.937
SHE80323.1
Protein of unknown function DUF58.
 
  
 0.931
SHE80245.1
Ca-activated chloride channel family protein.
 
     0.910
SHE80359.1
MoxR-like ATPase.
 
 
 0.847
SHE77261.1
General secretion pathway protein J.
  
     0.728
SHE44922.1
Protein of unknown function.
  
     0.652
SHE80117.1
Dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.625
SHE77289.1
General secretion pathway protein I.
 
     0.569
SHF06193.1
Hypothetical protein.
  
     0.556
Your Current Organism:
Thermomonas hydrothermalis
NCBI taxonomy Id: 213588
Other names: ATCC BAA-470, DSM 14834, T. hydrothermalis, Thermomonas hydrothermalis Alves et al. 2003, strain SGM-6
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