Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE30226.1 | SHF13620.1 | SAMN02745204_00157 | SAMN02745204_01864 | Protein of unknown function. | Catecholate siderophore receptor. | 0.456 |
SHE72236.1 | SHE74453.1 | SAMN02745204_01017 | SAMN02745204_01052 | FecR family protein. | Iron complex outermembrane recepter protein. | 0.634 |
SHE72236.1 | SHF13620.1 | SAMN02745204_01017 | SAMN02745204_01864 | FecR family protein. | Catecholate siderophore receptor. | 0.504 |
SHE72236.1 | SHF26395.1 | SAMN02745204_01017 | SAMN02745204_02138 | FecR family protein. | TonB-dependent Receptor Plug Domain. | 0.643 |
SHE74453.1 | SHE72236.1 | SAMN02745204_01052 | SAMN02745204_01017 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.634 |
SHE74453.1 | SHE78489.1 | SAMN02745204_01052 | SAMN02745204_01130 | Iron complex outermembrane recepter protein. | TonB-dependent Receptor Plug Domain. | 0.672 |
SHE74453.1 | SHF13620.1 | SAMN02745204_01052 | SAMN02745204_01864 | Iron complex outermembrane recepter protein. | Catecholate siderophore receptor. | 0.713 |
SHE74453.1 | SHF26395.1 | SAMN02745204_01052 | SAMN02745204_02138 | Iron complex outermembrane recepter protein. | TonB-dependent Receptor Plug Domain. | 0.724 |
SHE78489.1 | SHE74453.1 | SAMN02745204_01130 | SAMN02745204_01052 | TonB-dependent Receptor Plug Domain. | Iron complex outermembrane recepter protein. | 0.672 |
SHE78489.1 | SHF13620.1 | SAMN02745204_01130 | SAMN02745204_01864 | TonB-dependent Receptor Plug Domain. | Catecholate siderophore receptor. | 0.476 |
SHE78489.1 | SHF26395.1 | SAMN02745204_01130 | SAMN02745204_02138 | TonB-dependent Receptor Plug Domain. | TonB-dependent Receptor Plug Domain. | 0.786 |
SHF09834.1 | SHF13620.1 | SAMN02745204_01789 | SAMN02745204_01864 | FTR1 family protein. | Catecholate siderophore receptor. | 0.494 |
SHF13582.1 | SHF13620.1 | SAMN02745204_01863 | SAMN02745204_01864 | Hypothetical protein. | Catecholate siderophore receptor. | 0.830 |
SHF13582.1 | SHF13656.1 | SAMN02745204_01863 | SAMN02745204_01865 | Hypothetical protein. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | 0.456 |
SHF13582.1 | SHF13685.1 | SAMN02745204_01863 | SAMN02745204_01866 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.456 |
SHF13620.1 | SHE30226.1 | SAMN02745204_01864 | SAMN02745204_00157 | Catecholate siderophore receptor. | Protein of unknown function. | 0.456 |
SHF13620.1 | SHE72236.1 | SAMN02745204_01864 | SAMN02745204_01017 | Catecholate siderophore receptor. | FecR family protein. | 0.504 |
SHF13620.1 | SHE74453.1 | SAMN02745204_01864 | SAMN02745204_01052 | Catecholate siderophore receptor. | Iron complex outermembrane recepter protein. | 0.713 |
SHF13620.1 | SHE78489.1 | SAMN02745204_01864 | SAMN02745204_01130 | Catecholate siderophore receptor. | TonB-dependent Receptor Plug Domain. | 0.476 |
SHF13620.1 | SHF09834.1 | SAMN02745204_01864 | SAMN02745204_01789 | Catecholate siderophore receptor. | FTR1 family protein. | 0.494 |
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