Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE80449.1 | SHF32442.1 | SAMN02745204_01184 | SAMN02745204_02267 | Transposase, IS605 OrfB family, central region. | Putative transposase. | 0.759 |
SHE80449.1 | SHF32663.1 | SAMN02745204_01184 | SAMN02745204_02274 | Transposase, IS605 OrfB family, central region. | Predicted site-specific integrase-resolvase. | 0.699 |
SHE80449.1 | SHF35509.1 | SAMN02745204_01184 | SAMN02745204_02325 | Transposase, IS605 OrfB family, central region. | DNA binding domain-containing protein, excisionase family. | 0.572 |
SHE80449.1 | SHF35534.1 | SAMN02745204_01184 | SAMN02745204_02326 | Transposase, IS605 OrfB family, central region. | Probable transposase. | 0.772 |
SHF32442.1 | SHE80449.1 | SAMN02745204_02267 | SAMN02745204_01184 | Putative transposase. | Transposase, IS605 OrfB family, central region. | 0.759 |
SHF32442.1 | SHF35328.1 | SAMN02745204_02267 | SAMN02745204_02318 | Putative transposase. | Transposase, IS605 OrfB family, central region. | 0.759 |
SHF32442.1 | SHF35534.1 | SAMN02745204_02267 | SAMN02745204_02326 | Putative transposase. | Probable transposase. | 0.681 |
SHF32663.1 | SHE80449.1 | SAMN02745204_02274 | SAMN02745204_01184 | Predicted site-specific integrase-resolvase. | Transposase, IS605 OrfB family, central region. | 0.699 |
SHF32663.1 | SHF35328.1 | SAMN02745204_02274 | SAMN02745204_02318 | Predicted site-specific integrase-resolvase. | Transposase, IS605 OrfB family, central region. | 0.699 |
SHF32663.1 | SHF35509.1 | SAMN02745204_02274 | SAMN02745204_02325 | Predicted site-specific integrase-resolvase. | DNA binding domain-containing protein, excisionase family. | 0.773 |
SHF32663.1 | SHF35534.1 | SAMN02745204_02274 | SAMN02745204_02326 | Predicted site-specific integrase-resolvase. | Probable transposase. | 0.762 |
SHF35328.1 | SHF32442.1 | SAMN02745204_02318 | SAMN02745204_02267 | Transposase, IS605 OrfB family, central region. | Putative transposase. | 0.759 |
SHF35328.1 | SHF32663.1 | SAMN02745204_02318 | SAMN02745204_02274 | Transposase, IS605 OrfB family, central region. | Predicted site-specific integrase-resolvase. | 0.699 |
SHF35328.1 | SHF35509.1 | SAMN02745204_02318 | SAMN02745204_02325 | Transposase, IS605 OrfB family, central region. | DNA binding domain-containing protein, excisionase family. | 0.572 |
SHF35328.1 | SHF35534.1 | SAMN02745204_02318 | SAMN02745204_02326 | Transposase, IS605 OrfB family, central region. | Probable transposase. | 0.772 |
SHF35457.1 | SHF35509.1 | SAMN02745204_02323 | SAMN02745204_02325 | Plasmid stability protein. | DNA binding domain-containing protein, excisionase family. | 0.432 |
SHF35457.1 | SHF35534.1 | SAMN02745204_02323 | SAMN02745204_02326 | Plasmid stability protein. | Probable transposase. | 0.432 |
SHF35457.1 | SHF35564.1 | SAMN02745204_02323 | SAMN02745204_02327 | Plasmid stability protein. | Zinc-finger of transposase IS204/IS1001/IS1096/IS1165. | 0.412 |
SHF35457.1 | vapC-2 | SAMN02745204_02323 | SAMN02745204_02324 | Plasmid stability protein. | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.938 |
SHF35509.1 | SHE80449.1 | SAMN02745204_02325 | SAMN02745204_01184 | DNA binding domain-containing protein, excisionase family. | Transposase, IS605 OrfB family, central region. | 0.572 |
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