Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KIH78819.1 | ftsA | SMSRO_v1c17020 | SMSRO_v1c08740 | Hypothetical protein. | Cell division protein FtsA. | 0.896 |
KIH78819.1 | gpsB | SMSRO_v1c17020 | SMSRO_v1c16300 | Hypothetical protein. | DivIVA domain-containing protein. | 0.789 |
KIH78819.1 | sepF | SMSRO_v1c17020 | SMSRO_v1c08760 | Hypothetical protein. | Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.718 |
KIH79337.1 | gpsB | SMSRO_v1c11250 | SMSRO_v1c16300 | Hypothetical protein. | DivIVA domain-containing protein. | 0.479 |
KIH79337.1 | recU | SMSRO_v1c11250 | SMSRO_v1c16310 | Hypothetical protein. | Holliday junction-specific endonuclease; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.663 |
KIH79524.1 | gpsB | SMSRO_v1c05280 | SMSRO_v1c16300 | Hypothetical protein. | DivIVA domain-containing protein. | 0.587 |
KIH79714.1 | gpsB | SMSRO_v1c07200 | SMSRO_v1c16300 | Hypothetical protein. | DivIVA domain-containing protein. | 0.491 |
ftsA | KIH78819.1 | SMSRO_v1c08740 | SMSRO_v1c17020 | Cell division protein FtsA. | Hypothetical protein. | 0.896 |
ftsA | gpsB | SMSRO_v1c08740 | SMSRO_v1c16300 | Cell division protein FtsA. | DivIVA domain-containing protein. | 0.459 |
ftsA | sepF | SMSRO_v1c08740 | SMSRO_v1c08760 | Cell division protein FtsA. | Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.961 |
gpsB | KIH78819.1 | SMSRO_v1c16300 | SMSRO_v1c17020 | DivIVA domain-containing protein. | Hypothetical protein. | 0.789 |
gpsB | KIH79337.1 | SMSRO_v1c16300 | SMSRO_v1c11250 | DivIVA domain-containing protein. | Hypothetical protein. | 0.479 |
gpsB | KIH79524.1 | SMSRO_v1c16300 | SMSRO_v1c05280 | DivIVA domain-containing protein. | Hypothetical protein. | 0.587 |
gpsB | KIH79714.1 | SMSRO_v1c16300 | SMSRO_v1c07200 | DivIVA domain-containing protein. | Hypothetical protein. | 0.491 |
gpsB | ftsA | SMSRO_v1c16300 | SMSRO_v1c08740 | DivIVA domain-containing protein. | Cell division protein FtsA. | 0.459 |
gpsB | recU | SMSRO_v1c16300 | SMSRO_v1c16310 | DivIVA domain-containing protein. | Holliday junction-specific endonuclease; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.721 |
gpsB | rplGA_1 | SMSRO_v1c16300 | SMSRO_v1c17650 | DivIVA domain-containing protein. | Putative ribosomal protein l7ae. | 0.647 |
gpsB | sepF | SMSRO_v1c16300 | SMSRO_v1c08760 | DivIVA domain-containing protein. | Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.463 |
recU | KIH79337.1 | SMSRO_v1c16310 | SMSRO_v1c11250 | Holliday junction-specific endonuclease; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | Hypothetical protein. | 0.663 |
recU | gpsB | SMSRO_v1c16310 | SMSRO_v1c16300 | Holliday junction-specific endonuclease; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | DivIVA domain-containing protein. | 0.721 |
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