Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KIH78757.1 | KIH78758.1 | SMSRO_v1c16340 | SMSRO_v1c16350 | Hypothetical protein. | Putative transposase, family 1. | 0.686 |
KIH78757.1 | KIH78759.1 | SMSRO_v1c16340 | SMSRO_v1c16360 | Hypothetical protein. | Putative transposase, family 4. | 0.623 |
KIH78757.1 | KIH78760.1 | SMSRO_v1c16340 | SMSRO_v1c16370 | Hypothetical protein. | Putative transposase, family 3. | 0.447 |
KIH78757.1 | hupB | SMSRO_v1c16340 | SMSRO_v1c16330 | Hypothetical protein. | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.472 |
KIH78758.1 | KIH78757.1 | SMSRO_v1c16350 | SMSRO_v1c16340 | Putative transposase, family 1. | Hypothetical protein. | 0.686 |
KIH78758.1 | KIH78759.1 | SMSRO_v1c16350 | SMSRO_v1c16360 | Putative transposase, family 1. | Putative transposase, family 4. | 0.701 |
KIH78758.1 | KIH78760.1 | SMSRO_v1c16350 | SMSRO_v1c16370 | Putative transposase, family 1. | Putative transposase, family 3. | 0.497 |
KIH78758.1 | hupB | SMSRO_v1c16350 | SMSRO_v1c16330 | Putative transposase, family 1. | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.424 |
KIH78759.1 | KIH78757.1 | SMSRO_v1c16360 | SMSRO_v1c16340 | Putative transposase, family 4. | Hypothetical protein. | 0.623 |
KIH78759.1 | KIH78758.1 | SMSRO_v1c16360 | SMSRO_v1c16350 | Putative transposase, family 4. | Putative transposase, family 1. | 0.701 |
KIH78759.1 | KIH78760.1 | SMSRO_v1c16360 | SMSRO_v1c16370 | Putative transposase, family 4. | Putative transposase, family 3. | 0.556 |
KIH78760.1 | KIH78757.1 | SMSRO_v1c16370 | SMSRO_v1c16340 | Putative transposase, family 3. | Hypothetical protein. | 0.447 |
KIH78760.1 | KIH78758.1 | SMSRO_v1c16370 | SMSRO_v1c16350 | Putative transposase, family 3. | Putative transposase, family 1. | 0.497 |
KIH78760.1 | KIH78759.1 | SMSRO_v1c16370 | SMSRO_v1c16360 | Putative transposase, family 3. | Putative transposase, family 4. | 0.556 |
hupB | KIH78757.1 | SMSRO_v1c16330 | SMSRO_v1c16340 | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein. | 0.472 |
hupB | KIH78758.1 | SMSRO_v1c16330 | SMSRO_v1c16350 | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Putative transposase, family 1. | 0.424 |