Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KIH78609.1 | KIH78610.1 | SMSRO_v1c20100 | SMSRO_v1c20110 | Putative transposase, family 2. | Putative transposase, family 1. | 0.428 |
KIH78610.1 | KIH78609.1 | SMSRO_v1c20110 | SMSRO_v1c20100 | Putative transposase, family 1. | Putative transposase, family 2. | 0.428 |
KIH78610.1 | KIH78612.1 | SMSRO_v1c20110 | SMSRO_v1c20130 | Putative transposase, family 1. | Hypothetical protein. | 0.693 |
KIH78610.1 | KIH78613.1 | SMSRO_v1c20110 | SMSRO_v1c20140 | Putative transposase, family 1. | Hypothetical protein. | 0.693 |
KIH78610.1 | KIH78614.1 | SMSRO_v1c20110 | SMSRO_v1c20150 | Putative transposase, family 1. | Hypothetical protein. | 0.693 |
KIH78610.1 | KIH78615.1 | SMSRO_v1c20110 | SMSRO_v1c20160 | Putative transposase, family 1. | Hypothetical protein. | 0.546 |
KIH78610.1 | atpA | SMSRO_v1c20110 | SMSRO_v1c20030 | Putative transposase, family 1. | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.500 |
KIH78610.1 | atpD | SMSRO_v1c20110 | SMSRO_v1c20010 | Putative transposase, family 1. | F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.494 |
KIH78610.1 | atpE | SMSRO_v1c20110 | SMSRO_v1c20060 | Putative transposase, family 1. | F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.509 |
KIH78610.1 | grpE | SMSRO_v1c20110 | SMSRO_v1c02970 | Putative transposase, family 1. | Molecular chaperone GrpE (heat shock protein); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. [...] | 0.412 |
KIH78610.1 | recT-8 | SMSRO_v1c20110 | SMSRO_v1c20120 | Putative transposase, family 1. | Recombinase, phage RecT family. | 0.693 |
KIH78612.1 | KIH78610.1 | SMSRO_v1c20130 | SMSRO_v1c20110 | Hypothetical protein. | Putative transposase, family 1. | 0.693 |
KIH78612.1 | KIH78613.1 | SMSRO_v1c20130 | SMSRO_v1c20140 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KIH78612.1 | KIH78614.1 | SMSRO_v1c20130 | SMSRO_v1c20150 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KIH78612.1 | KIH78615.1 | SMSRO_v1c20130 | SMSRO_v1c20160 | Hypothetical protein. | Hypothetical protein. | 0.605 |
KIH78612.1 | recT-8 | SMSRO_v1c20130 | SMSRO_v1c20120 | Hypothetical protein. | Recombinase, phage RecT family. | 0.773 |
KIH78613.1 | KIH78610.1 | SMSRO_v1c20140 | SMSRO_v1c20110 | Hypothetical protein. | Putative transposase, family 1. | 0.693 |
KIH78613.1 | KIH78612.1 | SMSRO_v1c20140 | SMSRO_v1c20130 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KIH78613.1 | KIH78614.1 | SMSRO_v1c20140 | SMSRO_v1c20150 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KIH78613.1 | KIH78615.1 | SMSRO_v1c20140 | SMSRO_v1c20160 | Hypothetical protein. | Hypothetical protein. | 0.605 |
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