Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RUM_02130 | RUM_02140 | RUM_02130 | RUM_02140 | Protein of unknown function (DUF3036). | Transcriptional regulator. | 0.801 |
RUM_02130 | RUM_02150 | RUM_02130 | RUM_02150 | Protein of unknown function (DUF3036). | Hypothetical protein. | 0.950 |
RUM_02130 | guaB | RUM_02130 | RUM_02120 | Protein of unknown function (DUF3036). | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.449 |
RUM_02140 | RUM_02130 | RUM_02140 | RUM_02130 | Transcriptional regulator. | Protein of unknown function (DUF3036). | 0.801 |
RUM_02140 | RUM_02150 | RUM_02140 | RUM_02150 | Transcriptional regulator. | Hypothetical protein. | 0.822 |
RUM_02140 | guaB | RUM_02140 | RUM_02120 | Transcriptional regulator. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.436 |
RUM_02150 | RUM_02130 | RUM_02150 | RUM_02130 | Hypothetical protein. | Protein of unknown function (DUF3036). | 0.950 |
RUM_02150 | RUM_02140 | RUM_02150 | RUM_02140 | Hypothetical protein. | Transcriptional regulator. | 0.822 |
RUM_02150 | guaB | RUM_02150 | RUM_02120 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.443 |
guaB | RUM_02130 | RUM_02120 | RUM_02130 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Protein of unknown function (DUF3036). | 0.449 |
guaB | RUM_02140 | RUM_02120 | RUM_02140 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Transcriptional regulator. | 0.436 |
guaB | RUM_02150 | RUM_02120 | RUM_02150 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Hypothetical protein. | 0.443 |